STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ping_0573PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ilo:IL2259 ABC-type multidrug transport system, ATPase component. (307 aa)    
Predicted Functional Partners:
Ping_0574
PFAM: ABC-2 type transporter; KEGG: vfi:VF2171 ABC transporter permease protein.
  
 0.983
Ping_1425
PFAM: ABC-2 type transporter; KEGG: ppr:PBPRB0850 hypothetical nitrous oxide metabolic protein.
  
 
 0.894
Ping_1680
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: wsu:WS2022 ABC transporter, ATP-binding protein.
    
0.893
Ping_2069
KEGG: rde:RD1_1973 ABC transporter, ATP-binding protein, putative; TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase.
 
 
0.803
msbA
Lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
 
0.797
Ping_0575
PFAM: putative methyltransferase; KEGG: pha:PSHAa2295 methyltransferase SAM dependent.
       0.789
Ping_0691
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO3128 ABC transporter, ATP-binding/permease protein, putative.
 
 
0.712
Ping_3709
ABC transporter permease protein; PFAM: protein of unknown function DUF214; KEGG: dar:Daro_3463 protein of unknown function DUF214.
 
      0.698
Ping_3708
ABC transporter permease protein; PFAM: protein of unknown function DUF214; KEGG: eba:ebA4058 putative ABC transporter protein.
 
      0.620
Ping_2332
ABC transporter ATP-binding and permease protein; PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: gme:Gmet_3416 ABC transporter-related protein.
 
 
0.591
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.