STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_0589Diguanylate cyclase/phosphodiesterase; PFAM: EAL domain protein; SMART: GGDEF domain containing protein; KEGG: psp:PSPPH_3939 diguanylate cyclase, putative. (554 aa)    
Predicted Functional Partners:
Ping_2550
TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: tbd:Tbd_1042 putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(s).
   0.973
Ping_2916
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: vpa:VPA0878 hypothetical protein.
 
  
 0.951
Ping_1699
Diguanylate cyclase with GAF sensor; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: pfl:PFL_3308 diguanylate cyclase, putative.
 
  
 0.893
Ping_3077
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; CHASE3 domain protein; KEGG: vfi:VFA0056 hypothetical protein.
    0.859
Ping_1306
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bxe:Bxe_A3335 putative diguanylate cyclase/phosphodiesterase(GGDEF & EAL domains).
 
  
 0.803
Ping_1198
PFAM: GGDEF domain containing protein; KEGG: mag:amb3617 hypothetical protein YddU.
  
  
 0.771
Ping_1835
TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; CHASE domain protein; PAS fold-3 domain protein; KEGG: tbd:Tbd_1411 putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain.
 
 0.762
Ping_1200
Diguanylate cyclase with PAS/PAC sensor; KEGG: vvy:VVA0239 hypothetical protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
 
 
 0.709
Ping_1205
Diguanylate cyclase with PAS/PAC sensor; KEGG: dar:Daro_2825 PAS:GGDEF; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
  
 0.699
Ping_1121
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: pha:PSHAa0644 two-component response regulator with GGDEF domain.
 
  
 0.644
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.