STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_0618KEGG: son:SO2064 hypothetical protein. (673 aa)    
Predicted Functional Partners:
Ping_0619
KEGG: pha:PSHAa2328 hypothetical protein.
 
   
 0.956
Ping_0620
PFAM: Uncharacterised conserved protein UCP025560; KEGG: abo:ABO_1821 hypothetical protein.
 
   
 0.935
Ping_1915
PFAM: surface antigen (D15); KEGG: pat:Patl_0260 surface antigen (D15).
  
 
 0.883
Ping_0617
KpsF/GutQ family protein; KEGG: pmu:PM0525 KpsF protein, putative; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS).
       0.773
Ping_1289
KEGG: cps:CPS_0276 hypothetical protein.
 
     0.444
Ping_0389
PFAM: protein of unknown function UPF0270; KEGG: pha:PSHAa2909 hypothetical protein; Belongs to the UPF0270 family.
  
     0.410
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.