STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_0630PFAM: NnrS family protein; KEGG: ilo:IL0194 heme/copper membrane protein. (394 aa)    
Predicted Functional Partners:
Ping_0631
TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: pha:PSHAa2419 hypothetical protein.
 
  
 0.789
Ping_2905
Fused nitric oxide dioxygenase and dihydropteridine reductase; PFAM: globin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: bca:BCE1571 flavohemoprotein; Belongs to the globin family.
  
  
 0.775
Ping_1429
PFAM: FMN-binding domain protein; KEGG: ppr:PBPRB0846 hypothetical NosR, regulator of nitric oxide reductase transcription.
 
    0.666
nosZ
Nitrous oxide reductase apoprotein; Nitrous-oxide reductase is part of a bacterial respiratory system which is activated under anaerobic conditions in the presence of nitrate or nitrous oxide; In the C-terminal section; belongs to the cytochrome c oxidase subunit 2 family.
 
  
 0.585
Ping_2067
PFAM: Sterol-binding domain protein; KEGG: vvy:VV2689 putative lipid carrier protein.
 
     0.556
Ping_1427
Transcriptional regulator for copper, periplasmic binding protein, LacI family protein; PFAM: periplasmic copper-binding; SMART: Parallel beta-helix repeat; Carbohydrate-binding and sugar hydrolysis; KEGG: ppr:PBPRB0848 hypothetical NosD, nitrous oxidase accessory protein.
 
    0.550
Ping_1424
PFAM: NosL family protein; KEGG: ppr:PBPRB0851 hypothetical NosL protein.
 
     0.538
Ping_1425
PFAM: ABC-2 type transporter; KEGG: ppr:PBPRB0850 hypothetical nitrous oxide metabolic protein.
 
     0.514
Ping_0302
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; KEGG: shm:Shewmr7_3944 transcriptional regulator, XRE family.
  
     0.449
Ping_1426
ABC transporter for copper ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ppr:PBPRB0849 hypothetical NosF protein.
  
    0.425
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.