STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_0636Sodium/proton antiporter, CPA1 family; PFAM: cyclic nucleotide-binding; sodium/hydrogen exchanger; KEGG: vvy:VV1429 NhaP-type Na+/H+ and K+/H+ antiporter; TC 2.A.36. (812 aa)    
Predicted Functional Partners:
Ping_0991
PFAM: Calcium-binding EF-hand-containing protein; KEGG: xcb:XC_3100 hypothetical protein.
   
 0.722
Ping_0637
PFAM: RNP-1 like RNA-binding protein; KEGG: pha:PSHAa0253 hypothetical protein.
       0.506
Ping_0635
KEGG: sde:Sde_3908 transcriptional regulator, MerR family.
       0.476
Ping_3145
ADP-ribose pyrophosphatase; PFAM: NUDIX hydrolase; KEGG: psp:PSPPH_4558 MutT domain protein-like.
  
     0.443
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.