STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dctQ-5PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: vvy:VV1578 hypothetical protein. (173 aa)    
Predicted Functional Partners:
Ping_0648
PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: vvy:VV1580 TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
  
 0.957
Ping_0646
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: vvy:VV1577 TRAP-type C4-dicarboxylate transport system, large permease component.
 
 
 0.942
Ping_2734
PFAM: UspA domain protein; KEGG: eci:UTI89_C0610 universal stress protein UspG.
  
     0.619
Ping_3073
Transcriptional regulator, TraR/DksA family protein; KEGG: rsp:RSP_4199 putative DnaK suppressor protein.
  
     0.540
paaN
TIGRFAM: phenylacetic acid degradation protein paaN; PFAM: aldehyde dehydrogenase; MaoC domain protein dehydratase; KEGG: ecj:JW1382 fused aldehyde dehydrogenase and enoyl-CoA hydratase.
       0.469
Ping_3544
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: hch:HCH_06432 TRAP-type C4-dicarboxylate transport system, large permease component.
 
 
 0.460
dctQ-3
PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: rde:RD1_0678 TRAP dicarboxylate transporter, DctQ subunit, putative.
  
     0.451
Ping_0661
PFAM: PaaX domain protein; PaaX domain protein, C-terminal domain; KEGG: ecj:JW1394 DNA-binding transcriptional regulator, aryl-CoA responsive.
 
     0.444
Ping_0658
TIGRFAM: uncharacterized domain 1; phenylacetic acid degradation protein PaaD; PFAM: thioesterase superfamily protein; KEGG: ecj:JW1391 predicted thioesterase.
 
     0.401
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.