STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_0656TIGRFAM: phenylacetate degradation probable enoyl-CoA hydratase paaB; PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pfl:PFL_3130 phenylacetic acid degradation protein PaaB; Belongs to the enoyl-CoA hydratase/isomerase family. (262 aa)    
Predicted Functional Partners:
Ping_0655
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ecj:JW1388 enoyl-CoA hydratase-isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
0.998
Ping_0657
PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: pen:PSEEN2793 3-hydroxyacyl-CoA dehydrogenase PhaC.
 
 0.998
Ping_0650
TIGRFAM: phenylacetate-CoA oxygenase, PaaG subunit; PFAM: phenylacetic acid catabolic family protein; KEGG: ecj:JW1383 predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation.
 
 
 0.994
Ping_0652
TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit; PFAM: phenylacetic acid catabolic family protein; KEGG: ecj:JW1385 predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation.
 
 
 0.994
Ping_0653
TIGRFAM: phenylacetate-CoA oxygenase, PaaJ subunit; PFAM: protein of unknown function DUF59; KEGG: ecj:JW5217 predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation.
 
 
 0.994
Ping_0654
TIGRFAM: phenylacetate-CoA oxygenase/reductase, PaaK subunit; PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: ecj:JW1387 predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation.
  
 
 0.994
Ping_0651
TIGRFAM: phenylacetate-CoA oxygenase, PaaH subunit; PFAM: phenylacetic acid degradation B; KEGG: ecj:JW1384 predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation.
 
 
 0.990
paaN
TIGRFAM: phenylacetic acid degradation protein paaN; PFAM: aldehyde dehydrogenase; MaoC domain protein dehydratase; KEGG: ecj:JW1382 fused aldehyde dehydrogenase and enoyl-CoA hydratase.
 
 0.979
Ping_0659
KEGG: ecj:JW1392 predicted beta-ketoadipyl CoA thiolase; TIGRFAM: acetyl-CoA acetyltransferases; beta-ketoadipyl CoA thiolase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.978
Ping_2604
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: bba:Bd1836 fatty oxidation complex, alpha subunit.
 
0.956
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.