STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_0662KEGG: ecj:JW1395 predicted hexapeptide repeat acetyltransferase. (196 aa)    
Predicted Functional Partners:
Ping_0661
PFAM: PaaX domain protein; PaaX domain protein, C-terminal domain; KEGG: ecj:JW1394 DNA-binding transcriptional regulator, aryl-CoA responsive.
 
  
 0.882
Ping_0390
Carbonate dehydratase; PFAM: carbonic anhydrase; KEGG: pst:PSPTO_0994 carbonic anhydrase.
    
 
 0.583
paaN
TIGRFAM: phenylacetic acid degradation protein paaN; PFAM: aldehyde dehydrogenase; MaoC domain protein dehydratase; KEGG: ecj:JW1382 fused aldehyde dehydrogenase and enoyl-CoA hydratase.
 
   
 0.573
Ping_1529
PFAM: carbonic anhydrase; KEGG: noc:Noc_1341 carbonic anhydrase.
    
 
 0.573
Ping_0656
TIGRFAM: phenylacetate degradation probable enoyl-CoA hydratase paaB; PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pfl:PFL_3130 phenylacetic acid degradation protein PaaB; Belongs to the enoyl-CoA hydratase/isomerase family.
 
  
 0.550
Ping_0657
PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: pen:PSEEN2793 3-hydroxyacyl-CoA dehydrogenase PhaC.
 
   
 0.545
Ping_0658
TIGRFAM: uncharacterized domain 1; phenylacetic acid degradation protein PaaD; PFAM: thioesterase superfamily protein; KEGG: ecj:JW1391 predicted thioesterase.
 
  
 0.523
Ping_0652
TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit; PFAM: phenylacetic acid catabolic family protein; KEGG: ecj:JW1385 predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation.
 
   
 0.513
Ping_0651
TIGRFAM: phenylacetate-CoA oxygenase, PaaH subunit; PFAM: phenylacetic acid degradation B; KEGG: ecj:JW1384 predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation.
 
   
 0.502
Ping_0655
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ecj:JW1388 enoyl-CoA hydratase-isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
  
 0.492
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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