STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ping_0666PFAM: porin, Gram-negative type; KEGG: vpa:VPA0527 outer membrane protein N, non-specific porin. (324 aa)    
Predicted Functional Partners:
Ping_3015
PFAM: VacJ family lipoprotein; KEGG: son:SO3197 vacJ lipoprotein, putative.
   
 
 0.785
Ping_3613
PFAM: porin, Gram-negative type; KEGG: vvu:VV20580 outer membrane protein.
  
     0.757
Ping_1986
PFAM: protein of unknown function UPF0227; KEGG: vfi:VF1142 hypothetical protein.
  
     0.752
Ping_3387
KEGG: sdn:Sden_3057 hypothetical protein.
  
     0.749
Ping_1081
PFAM: Uncharacterized lipoprotein; KEGG: cps:CPS_0710 putative lipoprotein.
  
     0.735
Ping_2089
PFAM: GCN5-related N-acetyltransferase; KEGG: vpa:VPA0122 hypothetical protein.
  
     0.673
Ping_0347
Acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; KEGG: vfi:VF2557 acetolactate synthase small subunit.
  
     0.660
Ping_0690
PFAM: OmpA domain protein transmembrane region-containing protein; OmpA/MotB domain protein; KEGG: ppr:PBPRB0642 hypothetical outer membrane protein OmpA; Belongs to the outer membrane OOP (TC 1.B.6) superfamily.
   
 
 0.657
Ping_3156
Thiol:disulfide interchange protein DsbA; PFAM: DSBA oxidoreductase; KEGG: vvu:VV11036 thiol-disulfide isomerase and thioredoxins.
  
    0.603
Ping_0125
PFAM: UspA domain protein; KEGG: ppr:PBPRB0088 putative universal stress protein A.
  
     0.592
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.