STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Ping_0688Imelysin, Metallo peptidase, MEROPS family M75; KEGG: hch:HCH_00183 uncharacterized iron-regulated protein. (429 aa)    
Predicted Functional Partners:
Ping_0687
PFAM: protein of unknown function DUF1111; KEGG: hch:HCH_00182 predicted thiol oxidoreductase.
 
    0.975
Ping_3007
KEGG: vfi:VF2151 iron(III)-binding protein.
  
    0.892
Ping_1026
PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: ppr:PBPRA2525 hypothetical nitrate reductase large subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
    0.733
Ping_0689
Sterol desaturase-like protein; KEGG: ccr:CC0203 hypothetical protein.
       0.578
Ping_0271
KEGG: bpm:BURPS1710b_A0492 Tat (twin-arginine translocation) pathway signal sequence domain protein.
   
    0.560
Ping_3006
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vfi:VF2150 iron(III)-transport system permease protein SfuB.
  
    0.524
Ping_2746
ABC transporter periplasmic substrate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: vvu:VV21665 ABC-type Fe3+ transport system, periplasmic component.
  
    0.454
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.