STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cynSCyanate lyase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family. (146 aa)    
Predicted Functional Partners:
Ping_0390
Carbonate dehydratase; PFAM: carbonic anhydrase; KEGG: pst:PSPTO_0994 carbonic anhydrase.
  
 
 0.929
Ping_1529
PFAM: carbonic anhydrase; KEGG: noc:Noc_1341 carbonic anhydrase.
  
 
 0.924
Ping_1480
Carbonate dehydratase; PFAM: carbonic anhydrase; KEGG: hch:HCH_00805 carbonic anhydrase.
     
  0.900
Ping_0703
PFAM: formate/nitrite transporter; KEGG: tdn:Tmden_0716 formate/nitrite transporter.
 
   
 0.833
Ping_0704
PFAM: protein of unknown function RIO1; protein kinase; protein phosphatase 2C domain protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: dar:Daro_0820 protein kinase:protein phosphatase 2C-like.
 
     0.611
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
Server load: high (94%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.