STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_0834PFAM: protein of unknown function DUF446; KEGG: ilo:IL0850 hypothetical protein. (113 aa)    
Predicted Functional Partners:
nfuA
HesB/YadR/YfhF-family protein; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins.
  
     0.553
Ping_0833
KEGG: sdn:Sden_1544 hypothetical protein.
       0.539
Ping_0832
KEGG: vfi:VF0610 hypothetical protein.
       0.534
Ping_0830
KEGG: vch:VC0904 hypothetical protein.
       0.473
Ping_3186
PFAM: phospholipid/glycerol acyltransferase; KEGG: vch:VCA0921 hypothetical protein.
 
     0.471
Ping_3467
Membrane serine peptidase; PFAM: Rhomboid family protein; KEGG: sdn:Sden_3618 rhomboid-like protein.
  
     0.469
Ping_0831
KEGG: cps:CPS_3531 hypothetical protein.
       0.468
Ping_0829
PFAM: CreA family protein; KEGG: ppr:PBPRB0517 putative CreA protein.
       0.461
slmA
Cell division inhibitor SlmA; Required for nucleoid occlusion (NO) phenomenon, which prevents Z-ring formation and cell division over the nucleoid. Acts as a DNA-associated cell division inhibitor that binds simultaneously chromosomal DNA and FtsZ, and disrupts the assembly of FtsZ polymers. SlmA-DNA-binding sequences (SBS) are dispersed on non-Ter regions of the chromosome, preventing FtsZ polymerization at these regions.
  
     0.455
Ping_0835
KEGG: hch:HCH_00238 hypothetical protein.
       0.450
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.