STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_0840PFAM: major facilitator superfamily MFS_1; KEGG: yps:YPTB2866 putative MFS family 3-phenylpropionic acid transporter. (380 aa)    
Predicted Functional Partners:
Ping_3528
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: vvy:VVA0445 CbbY family protein.
  
  
 0.642
Ping_3315
PFAM: iron-containing alcohol dehydrogenase; aldehyde dehydrogenase; KEGG: vch:VC2033 alcohol dehydrogenase/acetaldehyde dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
 
  
 0.522
lacZ
Beta-galactosidase; PFAM: glycoside hydrolase, family 42, domain 5, loop region; glycoside hydrolase family 2, immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2, TIM barrel; glycoside hydrolase family 2, sugar binding; KEGG: vvy:VVA0165 beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
 
  
 0.484
Ping_0841
PFAM: FxsA cytoplasmic membrane protein; KEGG: vpa:VP2862 FxsA protein.
       0.471
Ping_1002
PFAM: protein of unknown function DUF1365; KEGG: vfi:VFA0761 plasmid partition ParA protein.
  
  
 0.467
Ping_1901
SMART: metal-dependent phosphohydrolase, HD region; KEGG: pfl:PFL_4240 chemotaxis sensory transducer family protein.
  
     0.439
phnX
Phosphonoacetaldehyde hydrolase; Involved in phosphonate degradation; Belongs to the HAD-like hydrolase superfamily. PhnX family.
 
  
 0.407
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.