STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_0849PFAM: monooxygenase, FAD-binding; KEGG: cps:CPS_3257 monooxygenase family protein. (484 aa)    
Predicted Functional Partners:
Ping_2986
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; KEGG: hch:HCH_04519 ABC-type branched-chain amino acid transport system, periplasmic component; TC 3.A.1.4.-.
   
  
 0.689
Ping_2351
PFAM: protein kinase; leucine-rich repeat protein; SMART: serine/threonine protein kinase; leucine-rich repeat-containing protein, typical subtype; KEGG: ppr:PBPRA2167 hypothetical protein.
  
     0.564
Ping_1848
KEGG: cps:CPS_2618 hypothetical protein.
  
     0.519
Ping_0856
PFAM: protein of unknown function UPF0153; KEGG: pha:PSHAb0120 hypothetical protein.
  
     0.511
pfaC
Polyunsaturated fatty acid synthase PfaC; PFAM: beta-ketoacyl synthase; Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; KEGG: cps:CPS_3102 polyunsaturated fatty acid synthase PfaC; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 
 0.489
Ping_1802
PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: cps:CPS_0986 major facilitator family transporter.
 
    0.479
Ping_1846
PFAM: SMC domain protein; KEGG: cps:CPS_2616 hypothetical protein.
  
     0.476
Ping_0437
Hypothetical protein; KEGG: sme:SMb21237 putative enzyme, C-terminal domain similar to sulfotransferase protein.
  
     0.462
Ping_1794
PFAM: glycosyl transferase, group 1; KEGG: cps:CPS_0439 hypothetical protein.
  
    0.458
Ping_1020
PFAM: Endonuclease/exonuclease/phosphatase; KEGG: cps:CPS_1308 endonuclease/exonuclease/phosphatase family protein.
  
     0.455
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.