STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_0859KEGG: sde:Sde_0395 hypothetical protein. (123 aa)    
Predicted Functional Partners:
Ping_0858
PFAM: protein of unknown function DUF526; KEGG: ppr:PBPRA0086 hypothetical protein.
       0.773
Ping_2718
KEGG: cps:CPS_1415 hypothetical protein.
  
     0.771
Ping_3486
KEGG: vpa:VP0120 hypothetical protein.
  
     0.544
Ping_0764
PFAM: lipopolysaccharide biosynthesis; KEGG: son:SO3191 chain length determinant protein.
  
     0.481
purC
Phosphoribosylaminoimidazolesuccinocarboxamide synthase; PFAM: SAICAR synthetase; KEGG: ppr:PBPRA1469 putative phosphoribosylaminoimidazole-succinocar boxamide synthase.
  
     0.405
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.