Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Ping_0926Peptidase M48, Ste24p; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. (481 aa)    
Predicted Functional Partners:
Ping_1073
TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: pha:PSHAa1133 arsenate reductase.
 
  
 0.772
Ping_3620
Thiol:disulfide interchange protein DsbA; PFAM: DSBA oxidoreductase; KEGG: sdn:Sden_0285 DsbA oxidoreductase.
  
     0.561
lptD
Organic solvent tolerance protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.
  
  
 0.545
Ping_3156
Thiol:disulfide interchange protein DsbA; PFAM: DSBA oxidoreductase; KEGG: vvu:VV11036 thiol-disulfide isomerase and thioredoxins.
 
   
 0.522
Ping_0928
Permease; PFAM: protein of unknown function UPF0118; KEGG: vfi:VF1921 transporter.
       0.510
Ping_2888
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family protein; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family.
  
    0.486
bamA
Surface antigen (D15); Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
   
 0.455
Ping_0927
Hypothetical protein; Belongs to the sulfur carrier protein TusA family.
       0.449
Ping_1469
PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: ppr:PBPRA2633 putative peptidyl-prolyl cis-trans isomerase D.
 
   
 0.436
Ping_0067
PFAM: MucB/RseB family protein; KEGG: cps:CPS_4127 sigma-E factor regulatory protein RseB.
  
    0.426
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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