STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_0959PFAM: UspA domain protein; KEGG: vch:VC0076 universal stress protein A. (148 aa)    
Predicted Functional Partners:
zapB
Hypothetical protein DUF904; Non-essential, abundant cell division factor that is required for proper Z-ring formation. It is recruited early to the divisome by direct interaction with FtsZ, stimulating Z-ring assembly and thereby promoting cell division earlier in the cell cycle. Its recruitment to the Z-ring requires functional FtsA or ZipA.
  
    0.701
Ping_1986
PFAM: protein of unknown function UPF0227; KEGG: vfi:VF1142 hypothetical protein.
  
     0.680
Ping_0715
KEGG: eca:ECA1027 hypothetical protein; Belongs to the UPF0325 family.
  
    0.665
Ping_3613
PFAM: porin, Gram-negative type; KEGG: vvu:VV20580 outer membrane protein.
  
     0.663
lapA
Hypothetical protein DUF1049; Involved in the assembly of lipopolysaccharide (LPS). Belongs to the LapA family.
  
     0.661
Ping_1975
CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: phospholipase D/Transphosphatidylase; KEGG: sgl:SG1911 CDP-diacylglycerol-serine O-phosphatidyltransferase.
  
    0.614
Ping_0061
PFAM: adenylate cyclase, class-I; KEGG: ppr:PBPRA3526 putative adenylate cyclase.
  
     0.578
Ping_2481
KEGG: sgl:SG0738 hypothetical protein.
  
     0.540
Ping_2955
PFAM: protein of unknown function DUF1100, hydrolase family protein; KEGG: ppr:PBPRA0837 conserved hypothetical protein; Belongs to the UPF0255 family.
  
     0.535
Ping_0666
PFAM: porin, Gram-negative type; KEGG: vpa:VPA0527 outer membrane protein N, non-specific porin.
  
     0.526
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.