STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ping_0987PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: hch:HCH_00065 signal transduction histidine kinase. (471 aa)    
Predicted Functional Partners:
baeR
PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: psb:Psyr_2868 response regulator receiver:transcriptional regulatory protein, C-terminal.
 0.997
gltR
PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: hch:HCH_06085 response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
 0.757
Ping_0282
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: son:SO4647 DNA-binding response regulator.
 
 0.723
Ping_0892
Envelope stress induced periplasmic protein, Spy-related protein; PFAM: protein of unknown function, Spy-related; KEGG: ddi:DDB0167328 hypothetical protein.
  
  
 0.719
Ping_1376
Envelope stress induced periplasmic protein, Spy-related protein; PFAM: protein of unknown function, Spy-related; KEGG: vpa:VP2857 putative periplasmic protein CpxP.
  
  
 0.719
Ping_1375
Two component transcriptional regulator, winged helix family protein; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ppr:PBPRA2178 hypothetical DNA-binding response regulator OmpR.
 
 0.699
Ping_2802
PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cvi:CV3107 probable two-component response regulator.
 
 
 0.687
Ping_2232
Two component transcriptional regulator, winged helix family protein; TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ppr:PBPRA0721 putative DNA-binding response regulator PhoB.
 
 0.668
Ping_1228
Two component transcriptional regulator, winged helix family protein; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: vpa:VP1734 DNA-binding response regulator.
 
 
 0.658
Ping_2024
KEGG: mag:amb2165 signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
 
 
 
 0.625
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.