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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_1009Transporter, NhaC family; PFAM: Na+/H+ antiporter NhaC; KEGG: vfi:VF1630 Na(+)/H(+) antiporter; TC 2.A.35. (521 aa)    
Predicted Functional Partners:
Ping_3490
Sodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 0.692
Ping_1392
PFAM: nucleoside recognition domain protein; KEGG: son:SO1245 hypothetical protein.
  
     0.660
Ping_0887
PFAM: Citrate transporter; Na+/H+ antiporter NhaC; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: vfi:VF0924 transport protein.
  
   
 0.652
Ping_2083
TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: jan:Jann_0020 amino acid carrier protein.
 
  
 0.494
Ping_1007
PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: ppr:PBPRA0542 putative glutamate synthase, large subunit.
       0.481
Ping_1008
TIGRFAM: glutamate synthases, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: vch:VC2374 glutamate synthase, small subunit.
       0.481
Ping_1010
KEGG: psb:Psyr_3988 hypothetical protein.
       0.443
Ping_2297
PFAM: sodium:neurotransmitter symporter; KEGG: ilo:IL1275 Na+-dependent transporter of the SNF family; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
 
     0.410
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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