STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_1044KEGG: pha:PSHAa0504 hypothetical protein. (328 aa)    
Predicted Functional Partners:
Ping_3044
KEGG: vfi:VF0426 hypothetical protein.
  
     0.602
Ping_2817
KEGG: pha:PSHAa0960 hypothetical protein.
  
     0.533
Ping_2282
PFAM: glutaredoxin 2; KEGG: son:SO1852 hypothetical protein.
  
     0.458
Ping_0829
PFAM: CreA family protein; KEGG: ppr:PBPRB0517 putative CreA protein.
  
    0.432
Ping_1070
KEGG: ppr:PBPRA2906 hypothetical protein.
  
     0.432
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.