STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_1070KEGG: ppr:PBPRA2906 hypothetical protein. (359 aa)    
Predicted Functional Partners:
Ping_1071
Regulatory inactivation of DnaA Hda protein; PFAM: Chromosomal replication initiator, DnaA; KEGG: sdy:SDY_2685 putative DNA replication factor; Belongs to the DnaA family.
       0.806
Ping_3044
KEGG: vfi:VF0426 hypothetical protein.
  
     0.740
Ping_1992
Tfp pilus assembly protein FimV-like protein; KEGG: vfi:VF1697 latent nuclear antigen.
  
     0.712
Ping_2205
KEGG: vch:VC1887 hypothetical protein.
  
     0.697
Ping_2282
PFAM: glutaredoxin 2; KEGG: son:SO1852 hypothetical protein.
  
     0.666
Ping_1988
Tfp pilus assembly protein FimV-like protein; KEGG: vfi:VF1697 latent nuclear antigen.
  
     0.653
Ping_1177
PFAM: LppC family lipoprotein; KEGG: ppr:PBPRA3227 hypothetical lipoprotein.
  
     0.625
Ping_0994
SMART: peptidase S16, lon domain protein; KEGG: son:SO1987 ATP-dependent protease La (LON) domain protein.
  
     0.595
Ping_0928
Permease; PFAM: protein of unknown function UPF0118; KEGG: vfi:VF1921 transporter.
 
     0.592
zipA
Cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins.
  
     0.588
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.