node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ping_0982 | Ping_1063 | Ping_0982 | Ping_1063 | PFAM: pseudouridine synthase; KEGG: pat:Patl_2378 pseudouridine synthase, Rsu; Belongs to the pseudouridine synthase RsuA family. | PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: cps:CPS_3519 ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family. | 0.420 |
Ping_0982 | cmk | Ping_0982 | Ping_3014 | PFAM: pseudouridine synthase; KEGG: pat:Patl_2378 pseudouridine synthase, Rsu; Belongs to the pseudouridine synthase RsuA family. | KEGG: ssn:SSO_0912 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region. | 0.573 |
Ping_0982 | der | Ping_0982 | Ping_1172 | PFAM: pseudouridine synthase; KEGG: pat:Patl_2378 pseudouridine synthase, Rsu; Belongs to the pseudouridine synthase RsuA family. | Small GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.660 |
Ping_1063 | Ping_0982 | Ping_1063 | Ping_0982 | PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: cps:CPS_3519 ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family. | PFAM: pseudouridine synthase; KEGG: pat:Patl_2378 pseudouridine synthase, Rsu; Belongs to the pseudouridine synthase RsuA family. | 0.420 |
Ping_1063 | cmk | Ping_1063 | Ping_3014 | PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: cps:CPS_3519 ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family. | KEGG: ssn:SSO_0912 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region. | 0.879 |
Ping_1063 | der | Ping_1063 | Ping_1172 | PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: cps:CPS_3519 ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family. | Small GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.819 |
Ping_1173 | bamB | Ping_1173 | Ping_1171 | KEGG: vpa:VP0614 hypothetical protein. | WD-40 repeat-containing protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.645 |
Ping_1173 | der | Ping_1173 | Ping_1172 | KEGG: vpa:VP0614 hypothetical protein. | Small GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.827 |
bamB | Ping_1173 | Ping_1171 | Ping_1173 | WD-40 repeat-containing protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | KEGG: vpa:VP0614 hypothetical protein. | 0.645 |
bamB | der | Ping_1171 | Ping_1172 | WD-40 repeat-containing protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Small GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.708 |
cmk | Ping_0982 | Ping_3014 | Ping_0982 | KEGG: ssn:SSO_0912 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region. | PFAM: pseudouridine synthase; KEGG: pat:Patl_2378 pseudouridine synthase, Rsu; Belongs to the pseudouridine synthase RsuA family. | 0.573 |
cmk | Ping_1063 | Ping_3014 | Ping_1063 | KEGG: ssn:SSO_0912 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region. | PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: cps:CPS_3519 ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family. | 0.879 |
cmk | der | Ping_3014 | Ping_1172 | KEGG: ssn:SSO_0912 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region. | Small GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.979 |
cmk | ffh | Ping_3014 | Ping_3368 | KEGG: ssn:SSO_0912 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region. | Signal recognition particle subunit FFH/SRP54 (srp54); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the i [...] | 0.683 |
cmk | ftsY | Ping_3014 | Ping_0623 | KEGG: ssn:SSO_0912 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region. | Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components. | 0.548 |
cmk | gpsA | Ping_3014 | Ping_3207 | KEGG: ssn:SSO_0912 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region. | PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE, N-terminal domain protein; KEGG: son:SO0053 glycerol-3-phosphate dehydrogenase (NAD(P)+). | 0.486 |
der | Ping_0982 | Ping_1172 | Ping_0982 | Small GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | PFAM: pseudouridine synthase; KEGG: pat:Patl_2378 pseudouridine synthase, Rsu; Belongs to the pseudouridine synthase RsuA family. | 0.660 |
der | Ping_1063 | Ping_1172 | Ping_1063 | Small GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: cps:CPS_3519 ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family. | 0.819 |
der | Ping_1173 | Ping_1172 | Ping_1173 | Small GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | KEGG: vpa:VP0614 hypothetical protein. | 0.827 |
der | bamB | Ping_1172 | Ping_1171 | Small GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | WD-40 repeat-containing protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.708 |