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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_1177PFAM: LppC family lipoprotein; KEGG: ppr:PBPRA3227 hypothetical lipoprotein. (677 aa)    
Predicted Functional Partners:
Ping_0157
TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; KEGG: ppr:PBPRA0274 putative penicillin-binding protein 1A.
  
 
 
 0.863
Ping_1176
PFAM: protein of unknown function UPF0102; KEGG: pfo:Pfl_4685 protein of unknown function UPF0102; Belongs to the UPF0102 family.
     
 0.813
Ping_1175
DnaA-interacting protein DiaA; TIGRFAM: phosphoheptose isomerase; KEGG: plu:plu4004 hypothetical protein.
 
    0.799
Ping_1174
PFAM: transport-associated; KEGG: pha:PSHAa2525 hypothetical protein.
  
    0.783
zipA
Cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins.
  
     0.727
Ping_0322
PFAM: protein of unknown function DUF1243; KEGG: vpa:VP0096 conserved hypothetical protein.
  
    0.701
Ping_0605
TIGRFAM: yecA family protein; PFAM: protein of unknown function UPF0149; KEGG: sdn:Sden_0830 YgfB and YecA; Belongs to the UPF0149 family.
  
     0.674
lolB
Outer membrane lipoprotein LolB; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein.
  
   
 0.674
Ping_1170
KEGG: vpa:VP0610 hypothetical protein.
  
     0.670
Ping_3639
PFAM: HemY domain protein; KEGG: ppr:PBPRA3531 hypothetical HemY protein.
  
     0.660
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.