Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene co-occurrence
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Score
Ping_1222KEGG: vpa:VP0813 putative nitrogen regulatory protein P-II family protein. (116 aa)    
Predicted Functional Partners:
Ping_1223
Putative signal-transduction protein with CBS domains; PFAM: CBS domain containing protein; KEGG: vvy:VV0994 hypothetical protein.
 
    0.961
Ping_1220
PFAM: protein of unknown function DUF1538; KEGG: vvy:VV0991 hypothetical protein.
 
     0.951
Ping_1221
ABC transporter for copper permease protein; PFAM: protein of unknown function DUF1538; KEGG: vpa:VP0812 hypothetical protein.
 
     0.951
Ping_2650
KEGG: sdn:Sden_0766 ammonium transporter; TIGRFAM: PAS sensor protein; diguanylate cyclase; ammonium transporter; PFAM: GGDEF domain containing protein; EAL domain protein; Rh family protein/ammonium transporter; PAS fold domain protein; SMART: PAS domain containing protein; TC 1.A.11.
  
 
 0.743
Ping_1627
PFAM: Rh family protein/ammonium transporter; KEGG: hch:HCH_02676 ammonia permease; TC 1.A.11.
  
 
 0.727
Ping_3025
TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: ppr:PBPRA3185 putative ammonium transporter; TC 1.A.11.
  
 
 0.727
Ping_1007
PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: ppr:PBPRA0542 putative glutamate synthase, large subunit.
  
  
 0.706
argA
N-acetylglutamate synthase; KEGG: eca:ECA0999 amino-acid acetyltransferase; TIGRFAM: amino-acid N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; aspartate/glutamate/uridylate kinase; Belongs to the acetyltransferase family. ArgA subfamily.
   
 
 0.647
argB
N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
    
 
 0.641
Ping_3487
PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; SMART: PAS domain containing protein; KEGG: vpa:VP0119 nitrogen regulation protein.
  
 
 0.626
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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