STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_1256Hypothetical protein. (103 aa)    
Predicted Functional Partners:
Ping_1255
KEGG: cya:CYA_0826 gas vesicle protein GvpN; TIGRFAM: gas vesicle protein GvpN; PFAM: ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase.
       0.664
Ping_1257
Hypothetical protein.
       0.552
Ping_1254
Hypothetical protein; KEGG: tcr:504239.220 mucin-associated surface protein (MASP) Pfam: Vicilin_N PROSITE: ALA_RICH CHEMOTAXIS_TRANSDUC_2.
       0.439
Ping_1258
PFAM: Gas vesicle synthesis GvpLGvpF; KEGG: mxa:MXAN_2769 gas vesicle protein, GvpL/GvpF family.
       0.437
Ping_1259
KEGG: pfa:PF14_0480 hypothetical protein.
       0.430
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.