STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_1262Gas vesicle protein GVPa; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. (101 aa)    
Predicted Functional Partners:
Ping_1261
PFAM: Gas vesicle K; KEGG: mxa:MXAN_2766 putative gas vesicle protein GvpK.
 
   
 0.956
Ping_1260
PFAM: gas vesicle protein GVPa; KEGG: plt:Plut_0704 hypothetical protein.
 
     0.946
Ping_1258
PFAM: Gas vesicle synthesis GvpLGvpF; KEGG: mxa:MXAN_2769 gas vesicle protein, GvpL/GvpF family.
 
   
 0.922
Ping_1255
KEGG: cya:CYA_0826 gas vesicle protein GvpN; TIGRFAM: gas vesicle protein GvpN; PFAM: ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase.
 
   
 0.845
gvpA
Gas vesicle protein GVPa; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the structure.
 
   
 0.839
gvpA-2
Gas vesicle protein GVPa; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the structure.
 
   
 0.813
Ping_1248
PFAM: Gas vesicle synthesis GvpLGvpF; KEGG: mxa:MXAN_2772 gas vesicle protein, GvpL/GvpF family.
 
     0.802
Ping_1750
KEGG: cya:CYA_0826 gas vesicle protein GvpN; TIGRFAM: gas vesicle protein GvpN; PFAM: ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase.
 
   
 0.795
Ping_1246
KEGG: mxa:MXAN_2774 heat shock protein, HSP20 family; Belongs to the small heat shock protein (HSP20) family.
 
     0.791
Ping_1249
PFAM: Gas vesicle synthesis GvpLGvpF; KEGG: mxa:MXAN_2771 gas vesicle protein, GvpL/GvpF family.
 
     0.780
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.