STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ping_1267PFAM: sodium/calcium exchanger membrane region; KEGG: rba:RB8016 probable sodium/calcium exchanger antiporter. (363 aa)    
Predicted Functional Partners:
Ping_1266
PFAM: stress protein; KEGG: ecs:ECs1355 putative tellurium resistance protein TerD.
       0.615
Ping_1776
KEGG: pol:Bpro_3282 hypothetical protein.
  
     0.591
Ping_3182
Similar to RTX toxin; TIGRFAM: putative outer membrane adhesin like proteiin; KEGG: cch:Cag_1242 VCBS.
  
    0.449
Ping_1350
PFAM: peptidase M56, BlaR1; KEGG: noc:Noc_0291 hypothetical protein.
 
     0.443
Ping_1270
KEGG: noc:Noc_1005 hypothetical protein.
   
   0.429
Ping_3231
Putative DNA polymerase III, psi subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown.
   
    0.428
Ping_1269
PFAM: sucrose-6F-phosphate phosphohydrolase; KEGG: noc:Noc_1004 hypothetical protein.
       0.411
Ping_1268
KEGG: noc:Noc_1003 hypothetical protein.
       0.410
Ping_3181
KEGG: pen:PSEEN0739 hypothetical protein.
  
    0.407
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.