Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Ping_1294Hypothetical protein; KEGG: pha:PSHAb0262 putative orphan protein. (267 aa)    
Predicted Functional Partners:
Ping_0438
Transporter of NadC family protein; KEGG: mba:Mbar_B3744 hypothetical protein.
  
     0.723
Ping_0432
Protein involved in cellulose biosynthesis (CelD)-like protein; KEGG: mxa:MXAN_3233 hypothetical protein.
  
     0.717
Ping_0437
Hypothetical protein; KEGG: sme:SMb21237 putative enzyme, C-terminal domain similar to sulfotransferase protein.
  
     0.708
Ping_0423
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: sde:Sde_0178 hypothetical protein.
  
     0.607
Ping_2756
SMART: Water Stress and Hypersensitive response; KEGG: mxa:MXAN_6829 putative similar to late embryogenesis abundant proteins.
  
     0.605
Ping_1951
Methyl viologen efflux pump; PFAM: protein of unknown function DUF6, transmembrane; KEGG: vfi:VFA1080 transporter, drug/metabolite exporter family.
  
     0.585
Ping_0457
PFAM: glycosyl transferase, group 1; KEGG: pfu:PF0788 glycosyl transferase.
  
     0.579
Ping_2624
KEGG: pha:PSHAa1594 hypothetical protein.
  
     0.547
Ping_0456
PFAM: glycosyl transferase, group 1; KEGG: son:SO4681 glycosyl transferase, group 1 family protein.
  
     0.545
Ping_1020
PFAM: Endonuclease/exonuclease/phosphatase; KEGG: cps:CPS_1308 endonuclease/exonuclease/phosphatase family protein.
  
     0.535
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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