STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ping_1310Diheme-containing protein c4; KEGG: vpa:VP2015 putative cytochrome c. (210 aa)    
Predicted Functional Partners:
Ping_1309
Diheme-containing SoxA-like protein; KEGG: vpa:VP2016 hypothetical protein.
  
 0.988
Ping_2872
PFAM: cytochrome c1; KEGG: vfi:VF2217 cytochrome C1.
 
 
 0.957
petA
Ubiquinol-cytochrome c reductase iron-sulfur subunit PetA; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
 
 0.953
Ping_0170
PFAM: cytochrome c, class I; KEGG: vpa:VP0042 cytochrome c5.
 
 
 
 0.943
Ping_2873
Fused ubiquinol-cytochrome c reductase and cytochrome b/b6; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
 
 0.822
Ping_3629
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Rhodanese domain protein; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: vch:VCA0644 NADH oxidase, putative.
   
 
 0.801
Ping_0938
TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; PFAM: cytochrome C oxidase, mono-heme subunit/FixO; KEGG: vfi:VF1300 cytochrome c oxidase, monoheme subunit, membrane-bound.
  
 
 0.788
Ping_0939
TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; PFAM: cytochrome c oxidase, subunit I; KEGG: vch:VC1442 cytochrome c oxidase, subunit CcoN; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.776
Ping_2717
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 
 0.675
Ping_0936
Cytochrome c oxidase, cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
 0.593
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.