STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ping_1320KEGG: pha:PSHAb0336 hypothetical protein. (78 aa)    
Predicted Functional Partners:
rlmG
16S rRNA m(2)G 1207 methyltransferase / 23S rRNA m(2)G-1835 methyltransferase; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA.
  
     0.610
Ping_0950
Protein containing tetratricopeptide (TPR) repeat; KEGG: vvy:VVA0115 hypothetical protein.
  
     0.605
Ping_1319
TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: pat:Patl_2648 exodeoxyribonuclease III.
       0.536
Ping_0704
PFAM: protein of unknown function RIO1; protein kinase; protein phosphatase 2C domain protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: dar:Daro_0820 protein kinase:protein phosphatase 2C-like.
  
     0.458
Ping_1021
PFAM: protein kinase; SMART: tyrosine protein kinase; protein phosphatase 2C domain protein; serine/threonine protein kinase; KEGG: ppr:PBPRA2520 hypothetical protein.
  
     0.446
Ping_2478
KEGG: pha:PSHAa2990 hypothetical protein.
  
     0.431
Ping_3246
KEGG: ppr:PBPRB0433 hypothetical protein.
  
     0.430
Ping_0953
KEGG: vvy:VVA0118 thermostable hemolysin.
  
     0.414
Ping_1170
KEGG: vpa:VP0610 hypothetical protein.
  
     0.403
Ping_1890
PFAM: MscS Mechanosensitive ion channel; KEGG: pat:Patl_0259 MscS mechanosensitive ion channel.
  
    0.400
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.