STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ping_1344KEGG: ppr:PBPRB1782 putative transposase. (198 aa)    
Predicted Functional Partners:
Ping_1345
Transposase-like protein; KEGG: vvy:VV3211 transposase and inactivated derivative.
 
    0.947
Ping_0002
Transposase-like protein; KEGG: vvy:VV3211 transposase and inactivated derivative.
  
    0.776
Ping_1360
Transposase-like protein; KEGG: vvy:VV3211 transposase and inactivated derivative.
  
    0.776
Ping_1512
Transposase-like protein; KEGG: vvy:VV3211 transposase and inactivated derivative.
  
    0.776
Ping_2699
Transposase-like protein; KEGG: vvy:VV3211 transposase and inactivated derivative.
  
    0.776
Ping_3194
Transposase-like protein; KEGG: vvy:VV3211 transposase and inactivated derivative.
  
    0.776
Ping_1346
KEGG: abo:ABO_1375 hypothetical protein.
       0.661
Ping_0794
Hypothetical protein; KEGG: son:SOA0162 ISSod6, transposase.
 
    0.517
Ping_1552
PFAM: transposase, IS4 family protein; KEGG: son:SOA0162 ISSod6, transposase.
 
    0.488
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.