STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_1368KEGG: vfi:VFA0443 copper/silver resistance outer membrane protein. (437 aa)    
Predicted Functional Partners:
Ping_1369
TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: ppr:PBPRA1004 putative cation efflux system transmembrane protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   0.972
Ping_1370
TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: ppr:PBPRA1003 putative cation efflux system transmembrane protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  
 0.954
Ping_1757
TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: sdn:Sden_2205 membrane-fusion protein.
 
 
 0.664
Ping_2843
TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: cps:CPS_4324 type I secretion membrane fusion protein, HlyD family.
  
 
 0.583
Ping_3711
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: eba:ebA4062 HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.583
Ping_1371
KEGG: copA; copper resistance protein A.
       0.522
Ping_0423
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: sde:Sde_0178 hypothetical protein.
  
  
 0.432
Ping_0103
TIGRFAM: general secretion pathway protein J; KEGG: ppr:PBPRA3475 putative Type II secretory pathway, component EpsJ.
  
     0.415
Ping_2767
Mercuric reductase, membrane-associated; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: ppr:PBPRA2113 hypothetical protein.
  
     0.409
Ping_3183
KEGG: pub:SAR11_0933 AcrA-like protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.409
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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