STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ping_1387PFAM: cytochrome c, class I; KEGG: sit:TM1040_1744 cytochrome c, class I. (133 aa)    
Predicted Functional Partners:
Ping_2717
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
   
 
 0.773
Ping_1830
PFAM: cytochrome c, class I; KEGG: gox:GOX0585 cytochrome c subunit of aldehyde dehydrogenase.
 
 
 
 0.688
Ping_0936
Cytochrome c oxidase, cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
   
 
 0.640
Ping_3674
PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: rde:RD1_1477 hypothetical protein.
  
     0.599
msrP
Oxidoreductase, molybdopterin binding protein; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to [...]
   
 
 0.591
Ping_3675
PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: rde:RD1_1478 C4-dicarboxylate transport system C4-dicarboxylate-binding protein, putative.
  
     0.567
Ping_2734
PFAM: UspA domain protein; KEGG: eci:UTI89_C0610 universal stress protein UspG.
  
    0.501
Ping_3097
PFAM: major facilitator superfamily MFS_1; KEGG: sit:TM1040_1598 twin-arginine translocation pathway signal.
  
     0.413
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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