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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_1398TIGRFAM: CRISPR-associated protein, Csy2 family; KEGG: lpf:plpl0049 hypothetical protein. (318 aa)    
Predicted Functional Partners:
Ping_1397
TIGRFAM: CRISPR-associated protein, Csy1 family; KEGG: lpf:lpl2839 hypothetical protein.
   
 0.966
Ping_1399
TIGRFAM: CRISPR-associated protein, Csy3 family; KEGG: lpf:lpl2841 hypothetical protein.
 
   
 0.945
Ping_1400
TIGRFAM: CRISPR-associated protein, Csy4 family; KEGG: plu:plu1796 hypothetical protein.
 
   
 0.932
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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