STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Ping_1423Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: ppr:PBPRA1412 putative transcriptional regulator, LysR family. (311 aa)    
Predicted Functional Partners:
Ping_2316
PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: ccr:CC1117 transcriptional regulator, LysR family.
  
     0.754
Ping_2379
PFAM: regulatory protein, LysR; KEGG: vfi:VF2051 transcriptional regulators, LysR family.
  
     0.727
Ping_2130
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: pcr:Pcryo_1817 transcriptional regulator, LysR family.
  
     0.647
Ping_3497
Transcriptional regulator, substrate-binding, LysR family protein; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: ppr:PBPRA0273 putative Hydrogen peroxide-inducible genes activator; Belongs to the LysR transcriptional regulatory family.
  
     0.621
Ping_2416
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: psb:Psyr_2268 regulatory protein, LysR:LysR, substrate-binding; Belongs to the LysR transcriptional regulatory family.
  
     0.603
Ping_3247
PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: pha:PSHAb0105 putative transcriptional regulator (LysR family).
  
    0.558
Ping_0418
PFAM: regulatory protein, LysR; KEGG: gbe:GbCGDNIH1_1637 transcriptional regulators, LysR family.
  
     0.535
Ping_3660
PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: psp:PSPPH_0442 malonate utilization transcriptional regulator.
  
     0.528
Ping_1422
L-lactate transport; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
       0.519
ilvY
Transcriptional regulator IlvY, substrate-binding, LysR family protein; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: sdn:Sden_3416 LysR, substrate-binding; Belongs to the LysR transcriptional regulatory family.
  
     0.492
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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