Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
Experiments
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[Homology]
Score
Ping_1474PFAM: porin, Gram-negative type; KEGG: vvy:VV2720 outer membrane protein OmpU. (311 aa)    
Predicted Functional Partners:
Ping_3015
PFAM: VacJ family lipoprotein; KEGG: son:SO3197 vacJ lipoprotein, putative.
   
 
 0.785
zapB
Hypothetical protein DUF904; Non-essential, abundant cell division factor that is required for proper Z-ring formation. It is recruited early to the divisome by direct interaction with FtsZ, stimulating Z-ring assembly and thereby promoting cell division earlier in the cell cycle. Its recruitment to the Z-ring requires functional FtsA or ZipA.
  
     0.752
Ping_0553
Maltoporin; KEGG: vvy:VVA0142 maltoporin.
  
   
 0.705
Ping_3280
PFAM: fumarate reductase, subunit C; KEGG: cvi:CV3367 fumarate reductase, subunit C.
  
     0.672
Ping_2955
PFAM: protein of unknown function DUF1100, hydrolase family protein; KEGG: ppr:PBPRA0837 conserved hypothetical protein; Belongs to the UPF0255 family.
  
  
 0.665
Ping_0690
PFAM: OmpA domain protein transmembrane region-containing protein; OmpA/MotB domain protein; KEGG: ppr:PBPRB0642 hypothetical outer membrane protein OmpA; Belongs to the outer membrane OOP (TC 1.B.6) superfamily.
   
 
 0.657
Ping_3281
Fumarate reductase, D subunit; Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane.
  
     0.632
Ping_0061
PFAM: adenylate cyclase, class-I; KEGG: ppr:PBPRA3526 putative adenylate cyclase.
  
     0.606
Ping_2269
PFAM: sulfatase; KEGG: vch:VC2041 hypothetical protein.
  
     0.540
Ping_3217
PFAM: protein of unknown function DUF416; KEGG: sbo:SBO_4020 hypothetical protein.
  
     0.536
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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