STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Cooccurrence
Coexpression
Experiments
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[Homology]
Score
Ping_1529PFAM: carbonic anhydrase; KEGG: noc:Noc_1341 carbonic anhydrase. (193 aa)    
Predicted Functional Partners:
cynS
Cyanate lyase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family.
  
 
 0.919
Ping_1480
Carbonate dehydratase; PFAM: carbonic anhydrase; KEGG: hch:HCH_00805 carbonic anhydrase.
     
 0.909
Ping_0390
Carbonate dehydratase; PFAM: carbonic anhydrase; KEGG: pst:PSPTO_0994 carbonic anhydrase.
     
  0.900
Ping_0703
PFAM: formate/nitrite transporter; KEGG: tdn:Tmden_0716 formate/nitrite transporter.
  
    0.575
Ping_3306
PFAM: formate/nitrite transporter; KEGG: yps:YPTB1409 putative FNT family formate efflux transporter focA.
  
    0.575
Ping_0233
KEGG: shm:Shewmr7_0037 carbonic anhydrase, family 3.
    
 
 0.573
Ping_0662
KEGG: ecj:JW1395 predicted hexapeptide repeat acetyltransferase.
    
 
 0.573
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.559
Ping_1268
KEGG: noc:Noc_1003 hypothetical protein.
   
    0.526
Ping_1530
KEGG: cps:CPS_3965 hypothetical protein.
       0.506
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.