STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_1574PFAM: major facilitator superfamily MFS_1; KEGG: pha:PSHAa2409 permease. (398 aa)    
Predicted Functional Partners:
Ping_3037
PFAM: protein of unknown function DUF328; KEGG: vch:VC2355 hypothetical protein; Belongs to the UPF0246 family.
  
    0.770
Ping_3090
PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pha:PSHAa2207 carbohydrates permease.
  
    0.661
Ping_2674
PFAM: NAD-dependent epimerase/dehydratase; NmrA family protein; Male sterility C-terminal domain; KEGG: pat:Patl_1875 NAD-dependent epimerase/dehydratase.
  
     0.400
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.