node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ping_1124 | rlmM | Ping_1124 | Ping_1613 | Rod shape-determining protein MreD; Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins. Belongs to the MreD family. | Methyltransferase; Catalyzes the 2'-O-methylation at nucleotide C2498 in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily. | 0.405 |
Ping_1609 | Ping_1610 | Ping_1609 | Ping_1610 | KEGG: son:SO3830 hypothetical protein. | KEGG: vch:VC2176 conserved hypothetical protein. | 0.840 |
Ping_1609 | Ping_1612 | Ping_1609 | Ping_1612 | KEGG: son:SO3830 hypothetical protein. | PFAM: protein of unknown function DUF423; KEGG: pfl:PFL_5852 protein of unknown function (DUF423) superfamily. | 0.740 |
Ping_1609 | kdsA | Ping_1609 | Ping_1611 | KEGG: son:SO3830 hypothetical protein. | TIGRFAM: 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA; KEGG: son:SO3827 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase). | 0.763 |
Ping_1609 | prmC | Ping_1609 | Ping_1608 | KEGG: son:SO3830 hypothetical protein. | [protein release factor]-glutamine N5-methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. | 0.852 |
Ping_1609 | rlmM | Ping_1609 | Ping_1613 | KEGG: son:SO3830 hypothetical protein. | Methyltransferase; Catalyzes the 2'-O-methylation at nucleotide C2498 in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily. | 0.409 |
Ping_1610 | Ping_1609 | Ping_1610 | Ping_1609 | KEGG: vch:VC2176 conserved hypothetical protein. | KEGG: son:SO3830 hypothetical protein. | 0.840 |
Ping_1610 | Ping_1612 | Ping_1610 | Ping_1612 | KEGG: vch:VC2176 conserved hypothetical protein. | PFAM: protein of unknown function DUF423; KEGG: pfl:PFL_5852 protein of unknown function (DUF423) superfamily. | 0.783 |
Ping_1610 | kdsA | Ping_1610 | Ping_1611 | KEGG: vch:VC2176 conserved hypothetical protein. | TIGRFAM: 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA; KEGG: son:SO3827 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase). | 0.763 |
Ping_1610 | prmC | Ping_1610 | Ping_1608 | KEGG: vch:VC2176 conserved hypothetical protein. | [protein release factor]-glutamine N5-methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. | 0.720 |
Ping_1610 | rlmM | Ping_1610 | Ping_1613 | KEGG: vch:VC2176 conserved hypothetical protein. | Methyltransferase; Catalyzes the 2'-O-methylation at nucleotide C2498 in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily. | 0.469 |
Ping_1612 | Ping_1609 | Ping_1612 | Ping_1609 | PFAM: protein of unknown function DUF423; KEGG: pfl:PFL_5852 protein of unknown function (DUF423) superfamily. | KEGG: son:SO3830 hypothetical protein. | 0.740 |
Ping_1612 | Ping_1610 | Ping_1612 | Ping_1610 | PFAM: protein of unknown function DUF423; KEGG: pfl:PFL_5852 protein of unknown function (DUF423) superfamily. | KEGG: vch:VC2176 conserved hypothetical protein. | 0.783 |
Ping_1612 | kdsA | Ping_1612 | Ping_1611 | PFAM: protein of unknown function DUF423; KEGG: pfl:PFL_5852 protein of unknown function (DUF423) superfamily. | TIGRFAM: 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA; KEGG: son:SO3827 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase). | 0.798 |
Ping_1612 | prmC | Ping_1612 | Ping_1608 | PFAM: protein of unknown function DUF423; KEGG: pfl:PFL_5852 protein of unknown function (DUF423) superfamily. | [protein release factor]-glutamine N5-methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. | 0.649 |
Ping_1612 | rlmM | Ping_1612 | Ping_1613 | PFAM: protein of unknown function DUF423; KEGG: pfl:PFL_5852 protein of unknown function (DUF423) superfamily. | Methyltransferase; Catalyzes the 2'-O-methylation at nucleotide C2498 in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily. | 0.757 |
Ping_2267 | nfuA | Ping_2267 | Ping_3202 | PFAM: 37kDa nucleoid-associated protein; KEGG: vvy:VV1167 nucleoid-associated protein. | HesB/YadR/YfhF-family protein; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins. | 0.540 |
Ping_2267 | rlmM | Ping_2267 | Ping_1613 | PFAM: 37kDa nucleoid-associated protein; KEGG: vvy:VV1167 nucleoid-associated protein. | Methyltransferase; Catalyzes the 2'-O-methylation at nucleotide C2498 in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily. | 0.646 |
kdsA | Ping_1609 | Ping_1611 | Ping_1609 | TIGRFAM: 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA; KEGG: son:SO3827 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase). | KEGG: son:SO3830 hypothetical protein. | 0.763 |
kdsA | Ping_1610 | Ping_1611 | Ping_1610 | TIGRFAM: 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA; KEGG: son:SO3827 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase). | KEGG: vch:VC2176 conserved hypothetical protein. | 0.763 |