STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_1637KEGG: bca:BCE0977 hypothetical protein. (370 aa)    
Predicted Functional Partners:
Ping_1636
PFAM: membrane bound O-acyl transferase, MBOAT family protein; KEGG: gme:Gmet_2338 membrane bound O-acyl transferase, MBOAT; Belongs to the membrane-bound acyltransferase family.
 
     0.914
Ping_1634
KEGG: gme:Gmet_2339 putative acyl carrier protein.
       0.764
Ping_1635
methylmalonyl-CoA epimerase; YqjC Bacillus subtilis ortholog; KEGG: cac:CAC2192 lactoylglutathione lyase, YQJC B.subtilis ortholog.
       0.762
Ping_1633
TIGRFAM: HAD-superfamily phosphatase, subfamily IIIC; FkbH like protein; PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rsp:RSP_1535 hypothetical protein.
       0.748
Ping_2944
PFAM: membrane bound O-acyl transferase, MBOAT family protein; KEGG: ana:alr4060 probable alginate O-acetylation protein.
 
     0.486
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.