STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ping_1675KEGG: cps:CPS_1176 hypothetical protein. (149 aa)    
Predicted Functional Partners:
Ping_2220
PFAM: YebG family protein; KEGG: sdn:Sden_1719 YebG.
  
     0.563
Ping_2718
KEGG: cps:CPS_1415 hypothetical protein.
  
     0.552
Ping_3246
KEGG: ppr:PBPRB0433 hypothetical protein.
  
     0.496
Ping_2637
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: ppr:PBPRB0483 hypothetical protein.
  
     0.473
Ping_2712
KEGG: pha:PSHAa2867 transmembrane cytochrome oxidase associated protein.
  
     0.430
Ping_1318
TIGRFAM: pseudouridine synthase Rlu family protein, TIGR01621; PFAM: pseudouridine synthase; KEGG: vfi:VF1020 tRNA pseudouridine synthase A.
  
     0.420
Ping_0996
TIGRFAM: anti-sigma factor, putative, ChrR family; KEGG: son:SO1985 transcriptional activator, putative.
  
     0.417
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.