Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Ping_1681PFAM: protein of unknown function DUF140; KEGG: cje:Cj1646 putative ABC transport system permease protein. (383 aa)    
Predicted Functional Partners:
Ping_1679
PFAM: Mammalian cell entry related domain protein; KEGG: cje:Cj1648 putative ABC transport system substrate-bindin protein.
 
 0.999
Ping_1680
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: wsu:WS2022 ABC transporter, ATP-binding protein.
 
 0.999
Ping_2887
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pha:PSHAa2544 transport protein (ABC superfamily, atp-binding).
 
 0.998
Ping_2885
PFAM: Mammalian cell entry related domain protein; KEGG: vvy:VV0457 ABC-type transport system, periplasmic component.
 
 0.994
Ping_2884
ABC-type transporter periplasmic protein; PFAM: toluene tolerance family protein; KEGG: son:SO3951 hypothetical protein.
  
 
 0.972
Ping_2886
ABC-type transporter inner membrane protein; PFAM: protein of unknown function DUF140; KEGG: ilo:IL0404 ABC-type transport system involved in resistance to organic solvents, permease component.
 
0.947
Ping_1678
ABC-type uncharacterized transport system auxiliary component-like protein; KEGG: cbu:CBU_0730 hypothetical protein.
 
  
 0.941
Ping_2883
Hypothetical protein.
  
 0.867
Ping_2891
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO3960 ABC transporter, ATP-binding protein.
 
  
  0.664
Ping_3015
PFAM: VacJ family lipoprotein; KEGG: son:SO3197 vacJ lipoprotein, putative.
     
 0.644
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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