STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
pfaAPolyunsaturated fatty acid synthase PfaA; PFAM: beta-ketoacyl synthase; acyl transferase domain protein; short-chain dehydrogenase/reductase SDR; KR; KEGG: cps:CPS_3104 polyunsaturated fatty acid synthase PfaA. (2661 aa)    
Predicted Functional Partners:
pfaD
Polyunsaturated fatty acid synthase PfaD; PFAM: 2-nitropropane dioxygenase, NPD; KEGG: cps:CPS_3099 polyunsaturated fatty acid synthase PfaD.
 
 0.991
Ping_1217
NAD(P)-dependent nickel-iron dehydrogenase flavin-containing subunit; PFAM: Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: mca:MCA2724 NAD-reducing hydrogenase, alpha subunit.
  
 0.987
Ping_1999
PFAM: AMP-dependent synthetase and ligase; KEGG: ppr:PBPRA1464 peptide synthase.
 
 0.977
Ping_2722
PFAM: 4'-phosphopantetheinyl transferase; KEGG: cps:CPS_3106 4-phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily.
 
 0.973
Ping_3654
KEGG: pfo:Pfl_5296 acyl transferase region.
 
 0.932
Ping_0189
O-succinylbenzoic acid--CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: she:Shewmr4_3770 O-succinylbenzoate-CoA ligase.
  
 0.930
Ping_1014
PFAM: AMP-dependent synthetase and ligase; KEGG: ype:YPO2074 long-chain-fatty-acid-CoA ligase.
  
 0.930
pfaC
Polyunsaturated fatty acid synthase PfaC; PFAM: beta-ketoacyl synthase; Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; KEGG: cps:CPS_3102 polyunsaturated fatty acid synthase PfaC; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 
0.929
Ping_1685
KEGG: cps:CPS_3103 polyunsaturated fatty acid synthase PfaB.
 
   
0.925
Ping_1088
[Acyl-carrier-protein] S-malonyltransferase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase domain protein; KEGG: ppr:PBPRA1194 putative malonyl Coa-acyl carrier protein transacylase.
  
 0.921
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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