STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ping_1719SMART: zinc finger, CDGSH-type domain protein; KEGG: cps:CPS_2171 hypothetical protein. (79 aa)    
Predicted Functional Partners:
Ping_2312
PFAM: ferredoxin-dependent glutamate synthase; KEGG: pat:Patl_1434 ferredoxin-dependent glutamate synthase; Belongs to the glutamate synthase family.
 
     0.519
Ping_1720
KEGG: sde:Sde_0294 putative transcriptional regulator, fis family.
       0.504
Ping_1722
PFAM: protein of unknown function DUF6, transmembrane; KEGG: cps:CPS_4235 membrane protein.
 
     0.425
Ping_1718
KEGG: vfi:VFA1062 transporter, NRAMP family.
       0.410
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.