STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ping_1728KEGG: son:SO0822 outer membrane efflux family protein. (116 aa)    
Predicted Functional Partners:
Ping_1757
TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: sdn:Sden_2205 membrane-fusion protein.
  
 
 0.776
hlyD
Secretion protein HlyD; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: son:SO3483 HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.715
Ping_0664
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: son:SO3102 AcrA/AcrE family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.715
Ping_0868
TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: cps:CPS_4621 efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.715
Ping_1369
TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: ppr:PBPRA1004 putative cation efflux system transmembrane protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.715
Ping_3183
KEGG: pub:SAR11_0933 AcrA-like protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.715
Ping_3475
Secretion protein HlyD-like protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: vvy:VV0038 membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.715
Ping_2843
TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: cps:CPS_4324 type I secretion membrane fusion protein, HlyD family.
  
 
 0.701
Ping_3711
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: eba:ebA4062 HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.641
Ping_3387
KEGG: sdn:Sden_3057 hypothetical protein.
  
     0.601
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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