STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ping_1734PFAM: MscS Mechanosensitive ion channel; KEGG: pat:Patl_3399 MscS mechanosensitive ion channel. (358 aa)    
Predicted Functional Partners:
Ping_2829
PFAM: MscS Mechanosensitive ion channel; KEGG: cps:CPS_1934 mechanosensitive ion channel family protein.
  
     0.651
Ping_0541
PFAM: MscS Mechanosensitive ion channel; KEGG: pca:Pcar_0812 putative transport protein.
  
     0.540
Ping_1890
PFAM: MscS Mechanosensitive ion channel; KEGG: pat:Patl_0259 MscS mechanosensitive ion channel.
 
  
 0.464
Ping_1553
PFAM: multiple antibiotic resistance (MarC)-related proteins; KEGG: rxy:Rxyl_0955 multiple antibiotic resistance (MarC)-related proteins.
 
    0.416
Ping_1391
PFAM: multiple antibiotic resistance (MarC)-related proteins; KEGG: sal:Sala_3099 multiple antibiotic resistance (MarC)-related proteins.
 
    0.415
Ping_1735
KEGG: ppr:PBPRB1261 hypothetical protein.
       0.414
Ping_1463
PFAM: multiple antibiotic resistance (MarC)-related proteins; KEGG: pca:Pcar_3029 conserved hypothetical protein TIGR00427.
 
    0.405
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.