STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_1735KEGG: ppr:PBPRB1261 hypothetical protein. (175 aa)    
Predicted Functional Partners:
Ping_3541
KEGG: sdn:Sden_0279 hypothetical protein.
  
    0.668
Ping_1736
PFAM: protein of unknown function DUF399; KEGG: vfi:VFA0756 putative lipoprotein.
 
     0.525
Ping_0666
PFAM: porin, Gram-negative type; KEGG: vpa:VPA0527 outer membrane protein N, non-specific porin.
  
     0.447
Ping_3105
KEGG: ava:Ava_3495 Tn7-like transposition protein D.
  
     0.440
Ping_2444
PFAM: peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins; KEGG: ppr:PBPRA0843 putative D,D-carboxypeptidase-related protein.
  
     0.429
Ping_1734
PFAM: MscS Mechanosensitive ion channel; KEGG: pat:Patl_3399 MscS mechanosensitive ion channel.
       0.414
Ping_2205
KEGG: vch:VC1887 hypothetical protein.
  
     0.414
Ping_1474
PFAM: porin, Gram-negative type; KEGG: vvy:VV2720 outer membrane protein OmpU.
  
     0.401
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.