STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ping_1736PFAM: protein of unknown function DUF399; KEGG: vfi:VFA0756 putative lipoprotein. (309 aa)    
Predicted Functional Partners:
Ping_0427
KEGG: sde:Sde_0133 uncharacterized protein involved in exopolysaccharide biosynthesis-like.
  
     0.527
Ping_1735
KEGG: ppr:PBPRB1261 hypothetical protein.
 
     0.525
Ping_0434
TIGRFAM: eight transmembrane protein EpsH; Eight transmembrane protein EpsH; KEGG: net:Neut_0899 eight transmembrane protein EpsH.
  
     0.497
Ping_3613
PFAM: porin, Gram-negative type; KEGG: vvu:VV20580 outer membrane protein.
  
     0.496
Ping_0384
PFAM: protein of unknown function DUF6, transmembrane; KEGG: vpa:VP0093 hypothetical protein.
  
     0.475
Ping_0423
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: sde:Sde_0178 hypothetical protein.
  
     0.450
Ping_0437
Hypothetical protein; KEGG: sme:SMb21237 putative enzyme, C-terminal domain similar to sulfotransferase protein.
  
     0.442
Ping_2694
PFAM: Endonuclease/exonuclease/phosphatase; KEGG: vch:VC2621 extracellular nuclease-related protein.
  
     0.436
Ping_0432
Protein involved in cellulose biosynthesis (CelD)-like protein; KEGG: mxa:MXAN_3233 hypothetical protein.
  
     0.433
Ping_0107
PFAM: type II secretion system protein N; KEGG: ppr:PBPRA3471 hypothetical general secretion pathway protein N.
  
     0.412
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.