Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
Ping_1757TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: sdn:Sden_2205 membrane-fusion protein. (443 aa)    
Predicted Functional Partners:
Ping_1756
PFAM: acriflavin resistance protein; KEGG: sdn:Sden_2206 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
   
 0.950
Ping_3360
TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: vvy:VV0583 outer membrane protein.
  
 0.911
Ping_2845
PFAM: outer membrane efflux protein; KEGG: cps:CPS_4326 outer membrane efflux protein.
  
 0.892
Ping_1758
Transcriptional regulator, TetR family; PFAM: regulatory protein, TetR; KEGG: sdn:Sden_2204 regulatory protein, TetR.
 
   
 0.840
Ping_3184
PFAM: outer membrane efflux protein; KEGG: pen:PSEEN0747 efflux outer membrane protein.
  
 0.798
Ping_1728
KEGG: son:SO0822 outer membrane efflux family protein.
  
 
 0.776
Ping_2844
PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: cps:CPS_4325 ABC transporter, ATP-binding/permease protein.
  
 
 0.719
Ping_0868
TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: cps:CPS_4621 efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
 0.690
Ping_1368
KEGG: vfi:VFA0443 copper/silver resistance outer membrane protein.
 
 
 0.662
Ping_3708
ABC transporter permease protein; PFAM: protein of unknown function DUF214; KEGG: eba:ebA4058 putative ABC transporter protein.
  
  
 0.580
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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