STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ping_1845PFAM: protein of unknown function DUF1415; KEGG: ilo:IL2495 hypothetical protein. (183 aa)    
Predicted Functional Partners:
Ping_1848
KEGG: cps:CPS_2618 hypothetical protein.
 
     0.511
Ping_0575
PFAM: putative methyltransferase; KEGG: pha:PSHAa2295 methyltransferase SAM dependent.
  
     0.487
Ping_1847
KEGG: cps:CPS_2617 hypothetical protein.
 
     0.485
Ping_1846
PFAM: SMC domain protein; KEGG: cps:CPS_2616 hypothetical protein.
 
     0.483
Ping_1844
PFAM: Patatin; KEGG: cps:CPS_2826 patatin-like phospholipase family protein.
       0.432
Ping_2063
Glucose-1-phosphate adenylyl transferase; PFAM: protein of unknown function DUF28; KEGG: vch:VCA0006 hypothetical protein.
  
     0.431
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.